...
First, you’ll mark the FICA batch by checking both the FICA Batch and No Authorization options. You’ll also set the program, check, and period dates as usual. We also suggest adding a note to the batch as FICA to avoid confusion.
...
Adding the time to the FICA batch can be done both manually as well as importedutilizing the import process. For more information regarding the import process, review the Import Process Page. Key differences when working with a FICA batch vs standard payroll is to first make sure it’s the time entries are marked as override, and the hours are set to negative as shown below. For example, if you are refunding $500.00, set the hour to -1.00 and the pay rate to $500.00.
...
At this point you can calculate wages as normalusual, but you will notice that the Medicare and FICA entries on the Payroll Deductions Tab are negative. Employee FICA and Medicare amounts are added together and become the net pay, which is the refund for the employee.
...